Developing a consensus profile of wild animal welfare: integrating non-invasive monitoring of the gut microbiome with stress physiology and behavior
Grantee: Sam Sonnega
Institution: University of Massachusetts Dartmouth, United States
Grant amount: $29,130
Grant type: Small grants
Focal species: White-footed mice (Peromyscus leucopus)
Conservation status: Least concern
Disciplines: Physiology, animal welfare science, animal behavior
Research location: United States
Publications
Sonnega, S. and Sheriff, M.J. (2024). Harnessing the gut microbiome: a potential biomarker for wild animal welfare. Frontiers in Veterinary Science, 11. https://doi.org/10.3389/fvets.2024.1474028
Project summary
This project will characterize the gut microbiome of wild white-footed mice (Peromyscus leucopus) and investigate its relationship with their stress physiology and behavior, including how it changes in response to ecological pressures. While a growing literature from lab-based studies has demonstrated the link between the gut microbiome and regulation of host physiology and behavior, the generality of these findings in ecological contexts remains largely untested. As part of this project, mice will be trapped during different seasons and fecal samples will be collected from which to measure both glucocorticoid concentrations and gut microbiome composition. Concurrently, open-field trials will be conducted to assess individual variation in cognitive bias towards optimism or pessimism (a well-established behavioral indicator of affective state). The mice’s perception of predation risk will also be experimentally manipulated by exposing free-living mice to playbacks of predator noises. By correlating the gut microbiome with both behavioral and endocrine metrics, a consensus profile of the mice’s welfare will be developed that reflects the complexity of their responses to both predictable and unpredictable environmental perturbations, and how those responses can scale up to population and ecosystem level changes via the demographic effects of stress in a so-called “landscape of fear.”
Why we funded this project
We are interested in the development and validation of the gut microbiome as a welfare indicator. Every additional indicator strengthens the interpretation of others, but understanding the gut microbiome may be especially important because it is part of the causal chain linking what is going on in the animal’s brain to fecal metabolites, which are often analyzed as a non-invasive and time-integrated record of physiological stress. This project also links and builds on other gut microbiome research we have funded (by Melissa Bateson, Pablo Capilla-Lasheras, and Davide Dominoni).
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